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baseurl = baseurl,
secret = get_secret(),
js = config.cdnjs,
css = config.cdncss
)
################################################################################
# Data decryption
def do_decrypt( data ):
try:
return AESCipher( session[ 'password' ] ).decrypt( data )
except:
return None
def do_encrypt( data ):
return AESCipher( session[ 'password' ] ).encrypt( data )
################################################################################
# File upload
@app.route( baseurl + '/upload', methods = [ 'GET', 'POST' ] )
@login_required
def upload_file():
upload_type = request.form.get( "upload_type", None )
if upload_type == None:
return jsonify( {
'error': True,
'msg': 'Must specify a file type to upload a file'
} )
if request.method == 'POST':
if 'file' not in request.files:
return jsonify( { 'error': True, 'msg': 'No file in the POST request' } )
elif 'upload_id' not in request.form:
return jsonify( { 'error': True, 'msg': 'No upload_id' } )
else:
try:
upload_id = request.form.get( "upload_id" )
sql = "SELECT id FROM submissions WHERE uuid = %s"
r = config.db.query( sql, ( upload_id, ) )
upload_id = r.fetchone()[ 'id' ]
except:
return jsonify( {
'error': True
} )
file = request.files[ 'file' ]
filename = do_encrypt( file.filename )
file_uuid = str( uuid4() )
fp = StringIO()
file.save( fp )
file_size = fp.tell()
fp.seek( 0 )
if upload_type in [ 'latent', 'tenprint_card_front', 'tenprint_card_back' ]:
img = Image.open( fp )
img_format = img.format
width, height = img.size
res = int( img.info[ 'dpi' ][ 0 ] )
img = rotate_image_upon_exif( img )
buff = StringIO()
img.save( buff, format = img_format )
buff.seek( 0 )
file_data = buff.getvalue()
if upload_type in [ 'tenprint_card_front', 'tenprint_card_back' ]:
create_thumbnail( file_uuid, img )
else:
file_data = fp.getvalue()
file_data = base64.b64encode( file_data )
if upload_type == "consent_form":
file_data = gpg.encrypt( file_data, config.gpg_key )
file_data = str( file_data )
sql = "SELECT id FROM files_type WHERE name = %s"
upload_type_id = config.db.query( sql, ( upload_type, ) ).fetchone()[ 0 ]
sql = "INSERT INTO files ( folder, creator, filename, type, format, size, width, height, resolution, uuid, data ) VALUES ( %s, %s, %s, %s, %s, %s, %s, %s, %s, %s, %s )"
data = ( upload_id, session[ 'user_id' ], filename, upload_type_id, img_format, file_size, width, height, res, file_uuid, file_data )
config.db.query( sql, data )
config.db.commit()
return jsonify( {
'error': False,
'filename': filename,
'filesize': file_size,
'uuid': file_uuid
} )
else:
return abort( 403 )
################################################################################
return render_template(
baseurl = baseurl,
js = config.cdnjs,
css = config.cdncss,
session_timeout = config.session_timeout,
session_security_key = session.get( "session_security_key" )
@app.route( baseurl + '/submission/do_new', methods = [ "GET", "POST" ] )
email = request.form.get( "email", False )
if email:
# Check for duplicate base upon the email data
sql = "SELECT id, email_hash FROM submissions WHERE submitter_id = %s"
r = config.db.query( sql, ( session[ 'user_id' ], ) )
for case in r.fetchall():
if pbkdf2( email, case[ 'email_hash' ] ):
return jsonify( {
'error': True,
'msg': "Email already used"
} )
break
email_aes = do_encrypt( email )
email_hash = pbkdf2( email, random_data( 50 ), 50000 )
upload_nickname = request.form.get( "upload_nickname", None )
upload_nickname = do_encrypt( upload_nickname )
submitter_id = session[ 'user_id' ]
status = "pending"
sql = "INSERT INTO submissions ( uuid, email_aes, email_hash, nickname, status, submitter_id ) VALUES ( %s, %s, %s, %s, %s, %s ) RETURNING id"
data = ( id, email_aes, email_hash, upload_nickname, status, submitter_id )
config.db.commit()
return jsonify( {
'error': False,
'id': id
} )
else:
return jsonify( {
'error': True,
'msg': "Email not provided"
} )
@app.route( baseurl + '/submission/<id>' )
@login_required
try:
sql = "SELECT email_aes as email, nickname, created_time FROM submissions WHERE submitter_id = %s AND uuid = %s"
r = config.db.query( sql, ( session[ 'user_id' ], id ) )
user = r.fetchone()
for key in [ 'email', 'nickname' ]:
user[ key ] = do_decrypt( user[ key ] )
return render_template(
baseurl = baseurl,
js = config.cdnjs,
css = config.cdncss,
session_timeout = config.session_timeout,
upload_id = id,
session_security_key = session.get( "session_security_key" ),
except:
return jsonify( {
'error': True,
'msg': "Case not found"
} )
@app.route( baseurl + '/submission/<id>/set/nickname', methods = [ 'POST' ] )

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@login_required
def submission_update_nickname( id ):
nickname = request.form.get( "nickname", None )
if nickname != None and len( nickname ) != 0:
try:
nickname = do_encrypt( nickname )
sql = "UPDATE submissions SET nickname = %s WHERE uuid = %s"
config.db.query( sql, ( nickname, id, ) )
config.db.commit()
return jsonify( {
'error': False
} )
except:
return jsonify( {
'error': True,
'message': "DB error"
} )
else:
return jsonify( {
'error': True,
'message': "No new nickname in the POST request"
} )
sql = "SELECT * FROM submissions WHERE submitter_id = %s ORDER BY created_time DESC"
r = config.db.query( sql, ( session[ 'user_id' ], ) )
q = r.fetchall()
donors = []
for donor in q:
donors.append( {
'id': donor.get( "id", None ),
'email': do_decrypt( donor.get( "email_aes", None ) ),
'nickname': do_decrypt( donor.get( "nickname", None ) ),
'uuid': donor.get( "uuid", None )
} )
return render_template(
baseurl = baseurl,
js = config.cdnjs,
css = config.cdncss,
session_timeout = config.session_timeout,
donors = donors,
session_security_key = session.get( "session_security_key" )
@app.route( baseurl + '/submission/<id>/latent/list' )
@login_required
sql = "SELECT id, nickname FROM submissions WHERE uuid = %s AND submitter_id = %s"
r = config.db.query( sql, ( id, session[ 'user_id' ], ) )
case_id, nickname = r.fetchone()
nickname = do_decrypt( nickname )
sql = "SELECT uuid, filename, size, creation_time FROM files WHERE folder = %s AND type = 3"
r = config.db.query( sql, ( case_id, ) )
files = r.fetchall()
for i, v in enumerate( files ):
v[ 'filename' ] = do_decrypt( v[ 'filename' ] )
v[ 'size' ] = round( ( float( v[ 'size' ] ) / ( 1024 * 1024 ) ) * 100 ) / 100
return render_template(
baseurl = baseurl,
js = config.cdnjs,
css = config.cdncss,
session_timeout = config.session_timeout,
submission_id = id,
nickname = nickname,
session_security_key = session.get( "session_security_key" )
@app.route( baseurl + '/submission/<id>/latent/<lid>' )
@login_required
def submission_latent( id, lid ):
sql = "SELECT id, nickname FROM submissions WHERE uuid = %s"
r = config.db.query( sql, ( id, ) )
submission_id, nickname = r.fetchone()
nickname = do_decrypt( nickname )
sql = """
SELECT
files.uuid, files.filename, files.note,
files.format, files.resolution, files.width, files.height, files.size,
files.creation_time, files.type
FROM files
WHERE
folder = %s AND
files.uuid = %s
"""
r = config.db.query( sql, ( submission_id, lid, ) )

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file = r.fetchone()
file[ 'size' ] = round( 100 * float( file[ 'size' ] ) / ( 1024 * 1024 ) ) / 100
file[ 'filename' ] = do_decrypt( file[ 'filename' ] )
file[ 'note' ] = do_decrypt( file[ 'note' ] )
return render_template(
"submission/latent.html",
baseurl = baseurl,
js = config.cdnjs,
css = config.cdncss,
session_timeout = config.session_timeout,
submission_id = id,

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file = file,
session_security_key = session.get( "session_security_key" )
)
################################################################################
# Image processing
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@app.route( baseurl + '/image/file/<id>/preview' )
@login_required
def image_file_serve( id ):
img, _ = image_serve( "thumbnails", id )
if img == None:
img, _ = image_serve( "files", id )
if img == None:
return abort( 404 )
img = create_thumbnail( id, img )
buff = pil2buffer( img, "PNG" )
return send_file( buff, mimetype = "image/png" )
@app.route( baseurl + '/image/segment/<tid>/<pc>' )
@login_required
def image_segment_serve( tid, pc ):
img, id = image_serve( "files_segments", ( tid, pc ) )
img = create_thumbnail( id, img )
buff = pil2buffer( img, "PNG" )
return send_file( buff, mimetype = "image/png" )
def image_serve( db, id ):
if not db in [ 'files', 'files_segments', 'thumbnails' ]:
raise Exception( "table not authorized" )
else:
if db == "files_segments" and isinstance( id, tuple ):
tp, pc = id
sql = "SELECT data, uuid FROM " + db + " WHERE tenprint = %s AND pc = %s"
p = ( tp, pc, )
else:
sql = "SELECT data, uuid FROM " + db + " WHERE uuid = %s"
p = ( id, )
data = config.db.query( sql, p ).fetchone()
if data == None:
return None, None
else:
img, rid = data
img = str2img( img )
return img, rid
def str2img( data ):
if data == None:
return None
else:
img = base64.b64decode( data )
buff = StringIO()
buff.write( img )
buff.seek( 0 )
img = Image.open( buff )
return img
@login_required
def img_info( id ):
d = do_img_info( id )
if d != None:
return jsonify( d )
else:
return abort( 404 )
def do_img_info( id ):
sql = "SELECT size, width, height, resolution, format FROM files WHERE uuid = %s"
r = config.db.query( sql, ( id, ) )
d = r.fetchone()
if d != None:
return dict( d )
else:
return None
def create_thumbnail( file_uuid, img ):
img.thumbnail( ( 1000, 1000 ) )
width, height = img.size
file_format = img.format
buff = StringIO()
img.save( buff, format = img.format )
img_size = buff.tell()
buff.seek( 0 )
img_data = buff.getvalue()
img_data = base64.b64encode( img_data )
sql = "INSERT INTO thumbnails ( uuid, width, height, size, format, data ) VALUES ( %s, %s, %s, %s, %s, %s )"
data = ( file_uuid, width, height, img_size, img.format, img_data, )
config.db.query( sql, data )
config.db.commit()
@app.route( baseurl + '/image/segment/<id>/start' )

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@login_required
def image_tenprint_segmentation( id ):
ret = do_image_tenprint_segmentation( id )
return jsonify( {
'error': False,
'data': ret
} )
def do_image_tenprint_segmentation( id ):
sql = "SELECT size, resolution, type, format, data FROM files WHERE uuid = %s"
r = config.db.query( sql, ( id, ) )
img = r.fetchone()
res = img[ 'resolution' ]
img_format = img[ 'format' ]
t = {
1: 'front',
2: 'back'
}[ img[ 'type' ] ]
img = base64.b64decode( img[ 'data' ] )
buff = StringIO()
buff.write( img )
buff.seek( 0 )
img = Image.open( buff )
sql = "SELECT template FROM file_template WHERE file = %s"
r = config.db.query( sql, ( id, ) )
template_id = r.fetchone()[ 'template' ]
zones = get_tenprint_template_zones( template_id, t )
for z in zones:
tl_x, tl_y, br_x, br_y = map( lambda v: v * res / 2.54 , [ z[ "tl_x" ], z[ "tl_y" ], z[ "br_x" ], z[ "br_y" ] ] )
tmp = img.crop( ( tl_x, tl_y, br_x, br_y ) )
buff = StringIO()
tmp.save( buff, format = img_format )
buff.seek( 0 )
file_data = buff.getvalue()
file_data = base64.b64encode( file_data )
sql = "SELECT id FROM files_segments WHERE tenprint = %s AND pc = %s"

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q = config.db.query( sql, ( id, z[ 'pc' ], ) ).fetchone()
if q == None:
sql = "INSERT INTO files_segments ( tenprint, uuid, pc, data ) VALUES ( %s, %s, %s, %s )"
data = ( id, str( uuid4() ), z[ 'pc' ], file_data )
config.db.query( sql, data )
else:
sql = "UPDATE files_segments SET data = %s WHERE tenprint = %s AND pc = %s"

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data = ( id, z[ 'pc' ], file_data )
config.db.query( sql, data )
config.db.commit()
return True

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################################################################################

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@app.route( baseurl + '/submission/<id>/tenprint/list' )

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@login_required
sql = "SELECT id, nickname FROM submissions WHERE uuid = %s"

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r = config.db.query( sql, ( id, ) )
submission_id, nickname = r.fetchone()
nickname = do_decrypt( nickname )

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sql = """
SELECT
id, filename, uuid, type, creation_time
FROM files
WHERE folder = %s AND ( type = 1 OR type = 2 )
ORDER BY creation_time DESC
"""

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r = config.db.query( sql, ( submission_id, ) )
q = r.fetchall()
tenprint_cards = {
'1': [],
'2': []
}

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for tenprint in q:
tenprint_cards[ str( tenprint[ 'type' ] ) ].append( {

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'id': tenprint.get( "id", None ),
'filename': do_decrypt( tenprint.get( "filename", None ) ),
'uuid': tenprint.get( "uuid", None ),
'type': tenprint.get( "type", None )

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} )
return render_template(

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baseurl = baseurl,
js = config.cdnjs,
css = config.cdncss,
session_timeout = config.session_timeout,
tenprint_cards_front = tenprint_cards[ '1' ],
tenprint_cards_back = tenprint_cards[ '2' ],
nickname = nickname,
session_security_key = session.get( "session_security_key" )

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)
@app.route( baseurl + '/submission/<id>/tenprint/<tid>' )

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@login_required
sql = "SELECT id, nickname FROM submissions WHERE uuid = %s"

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r = config.db.query( sql, ( id, ) )
submission_id, nickname = r.fetchone()
nickname = do_decrypt( nickname )

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sql = """
SELECT
files.uuid, files.filename, files.note,
files.format, files.resolution, files.width, files.height, files.size,
files.creation_time, files.type,

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file_template.template
FROM files

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LEFT JOIN file_template ON files.uuid = file_template.file

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WHERE
folder = %s AND
files.uuid = %s
"""
r = config.db.query( sql, ( submission_id, tid, ) )

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file = r.fetchone()
file[ 'size' ] = round( 100 * float( file[ 'size' ] ) / ( 1024 * 1024 ) ) / 100
file[ 'filename' ] = do_decrypt( file[ 'filename' ] )
file[ 'note' ] = do_decrypt( file[ 'note' ] )

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if file[ 'type' ] == 1:
t = 'front'
elif file[ 'type' ] == 2:
t = 'back'
############################################################################

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try:
sql = 'SELECT width, height, image_resolution FROM tenprint_cards WHERE id = %s LIMIT 1'
r = config.db.query( sql, ( file[ 'template' ], ) )
tmp = r.fetchone()
card_info = {
'width': int( round( float( tmp[ 'width' ] ) / 2.54 * tmp[ 'image_resolution' ] ) ),
'height': int( round( float( tmp[ 'height' ] ) / 2.54 * tmp[ 'image_resolution' ] ) ),
'width_cm': tmp[ 'width' ],
'height_cm': tmp[ 'height' ]
}
except:
card_info = {
'width': 0,
'height': 0,
'width_cm': 0,
'height_cm': 0
}

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############################################################################
sql = "SELECT id, country_code, name, width, height, size_display FROM tenprint_cards ORDER BY country_code"
tenprint_templates = config.db.query( sql ).fetchall()

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############################################################################
zones = get_tenprint_template_zones( file[ 'template' ], t )

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datacolumns = [ 'tl_x', 'tl_y', 'br_x', 'br_y', 'angle' ]
############################################################################
sql = 'SELECT width, height, resolution FROM files WHERE uuid = %s LIMIT 1'
r = config.db.query( sql, ( tid, ) )
img_info = r.fetchone()
svg_hw_factor = float( img_info[ 'width' ] ) / float( img_info[ 'height' ] )
return render_template(

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baseurl = baseurl,
js = config.cdnjs,
css = config.cdncss,
session_timeout = config.session_timeout,
upload_id = id,
tenprint_id = tid,
file = file,
session_security_key = session.get( "session_security_key" ),

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t = t,
card_id = file[ 'uuid' ],
card_info = card_info,
img_info = img_info,
svg_hw_factor = svg_hw_factor,
zones = zones,

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datacolumns = datacolumns,
tenprint_templates = tenprint_templates

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)
@app.route( baseurl + '/submission/<id>/tenprint/<file>/set/template', methods = [ 'GET', 'POST' ] )

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@login_required
def submission_tenprint_set_template( id, file ):
template = request.form.get( "template" )
sql = "SELECT id FROM file_template WHERE file = %s"
q = config.db.query( sql, ( file, ) ).fetchone()
if q == None:
sql = "INSERT INTO file_template ( file, template ) VALUES ( %s, %s )"
config.db.query( sql, ( file, template, ) )
config.db.commit()
else:
sql = "UPDATE file_template SET template = %s WHERE file = %s"
config.db.query( sql, ( template, file, ) )
config.db.commit()
return jsonify( {
'error': False
} )
@app.route( baseurl + '/submission/<id>/<t>/<file>/set/note', methods = [ 'POST' ] )
@login_required
def submission_file_set_note( id, t, file ):
note = request.form.get( "note" )
note = do_encrypt( note )
sql = "UPDATE files SET note = %s WHERE uuid = %s RETURNING id"
config.db.query( sql, ( note, file, ) )
config.db.commit()
return jsonify( {
'error': False
} )

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################################################################################
# Tenprint segments
@app.route( baseurl + '/submission/<id>/tenprint/<tid>/seg/list' )
@login_required
def submission_tenprint_segments_list( id, tid ):
sql = "SELECT id, nickname FROM submissions WHERE uuid = %s"
r = config.db.query( sql, ( id, ) )
submission_id, nickname = r.fetchone()
nickname = do_decrypt( nickname )
sql = "SELECT uuid, filename FROM files WHERE folder = %s AND files.uuid = %s"
r = config.db.query( sql, ( submission_id, tid, ) )
file = r.fetchone()
filename = do_decrypt( file[ 'filename' ] )
tid = file[ 'uuid' ]
############################################################################
sql = """
SELECT files_segments.pc, files_segments.data, pc.name
FROM files_segments
LEFT JOIN pc ON pc.id = files_segments.pc
WHERE tenprint = %s
"""
segments = config.db.query( sql, ( tid, ) ).fetchall()
############################################################################
return render_template(
"submission/segment_list.html",
baseurl = baseurl,
js = config.cdnjs,
css = config.cdncss,
session_timeout = config.session_timeout,
upload_id = id,
tenprint_id = tid,
nickname = nickname,
filename = filename,
submission_id = id,
tid = tid,
segments = segments,
session_security_key = session.get( "session_security_key" ),
)
################################################################################
# Tenprint templates
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def get_tenprint_template_zones( id, t ):
sql = """
SELECT
tenprint_zones.pc, tl_x, tl_y, br_x, br_y, angle, pc.name
FROM tenprint_zones
JOIN tenprint_zones_location ON tenprint_zones.pc = tenprint_zones_location.pc
JOIN pc ON tenprint_zones.pc = pc.id
WHERE
card = %s AND
tenprint_zones_location.side = %s
ORDER BY pc
"""
r = config.db.query( sql, ( id, t, ) ).fetchall()
zones = []
for pc, tl_x, tl_y, br_x, br_y, angle, pc_name in r:
tl_x = float_or_null( tl_x )
tl_y = float_or_null( tl_y )
br_x = float_or_null( br_x )
br_y = float_or_null( br_y )
zones.append( {
"pc": pc,
"tl_x": tl_x,
"tl_y": tl_y,
"br_x": br_x,
"br_y": br_y,
"angle": angle,
"pc_name": pc_name
} )
return zones
@app.route( baseurl + '/tenprint_template/<id>/<t>' )
@login_required
def tp_template( id, t ):
if t in [ 'front', 'back' ]:
sql = """SELECT
tenprint_zones.pc, tl_x, tl_y, br_x, br_y, angle, pc.name
FROM tenprint_zones
JOIN tenprint_zones_location ON tenprint_zones.pc = tenprint_zones_location.pc
JOIN pc ON tenprint_zones.pc = pc.id
WHERE card = %s AND tenprint_zones_location.side = %s ORDER BY pc
"""
r = config.db.query( sql, ( id, t, ) ).fetchall()
zones = []
for pc, tl_x, tl_y, br_x, br_y, angle, pc_name in r:
tl_x = float_or_null( tl_x )
tl_y = float_or_null( tl_y )
br_x = float_or_null( br_x )
br_y = float_or_null( br_y )
zones.append( {
"pc": pc,
"tl_x": tl_x,
"tl_y": tl_y,
"br_x": br_x,
"br_y": br_y,
"angle": angle,
"pc_name": pc_name
datacolumns = [ 'tl_x', 'tl_y', 'br_x', 'br_y', 'angle' ]

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committed
sql = 'SELECT id, country_code, width, height, size_display, image_' + t + '_width, image_' + t + '_height, image_resolution FROM tenprint_cards WHERE id = %s LIMIT 1'
r = config.db.query( sql, ( id, ) )
img_info = r.fetchone()
card_info = {
'width': int( round( float( img_info[ 'width' ] ) / 2.54 * img_info[ 'image_resolution' ] ) ),
'height': int( round( float( img_info[ 'height' ] ) / 2.54 * img_info[ 'image_resolution' ] ) ),
}

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svg_hw_factor = float( img_info[ 'image_' + t + '_width' ] ) / float( img_info[ 'image_' + t + '_height' ] )
baseurl = baseurl,
admin = int( session[ 'account_type' ] ) == 1,
js = config.cdnjs,
css = config.cdncss,
session_timeout = config.session_timeout,
account_type = session.get( "account_type", None ),
zones = zones,
img_info = img_info,
card_info = card_info,

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svg_hw_factor = svg_hw_factor,

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t = t,
datacolumns = datacolumns,
)
else:
return abort( 403 )
@app.route( baseurl + '/tenprint_template/image/<id>/<t>' )
@referer_required
@login_required
def tp_template_img( t, id ):
if t in [ 'front', 'back' ]:
sql = "SELECT image_front, image_back FROM tenprint_cards WHERE id = %s LIMIT 1"
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r = config.db.query( sql, ( id, ) )
img = r.fetchone()
if img != None:
img = base64.b64decode( img[ 'image_' + t ] )
buff = StringIO()
buff.write( img )
buff.seek( 0 )
img = Image.open( buff )
img.thumbnail( ( 1000, 1000 ) )
buff2 = StringIO()
img.save( buff2, format = 'PNG' )
buff2.seek( 0 )
return send_file( buff2, mimetype = "image/png" )
else:
return abort( 403 )

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committed
@app.route( baseurl + '/tenprint_template/zones/update/<card>', methods = [ "GET", "POST" ] )
@login_required

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def update_zone_coordinates( card ):
card = int( card )
data = request.form.get( "data" )

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if data != None:
data = json.loads( data )
for pc, value in data.iteritems():
pc = int( pc )
for coordinate, v in value.iteritems():
sql = "UPDATE tenprint_zones SET " + coordinate + " = %s WHERE card = %s AND pc = %s"
data = ( v, card, pc, )
config.db.query( sql, data )

Marco De Donno
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config.db.commit()
return jsonify( {
'error': False
} )
else:
return abort( 403 )
################################################################################
# Home page
@app.route( baseurl + '/' )
@login_required
return render_template(
"index.html",
baseurl = baseurl,
admin = int( session[ 'account_type' ] ) == 1,
js = config.cdnjs,
css = config.cdncss,
account_type = session.get( "account_type", None ),
session_security_key = session.get( "session_security_key" )
################################################################################
# Main startup
if __name__ == '__main__':
gpg = gnupg.GPG()
for file in os.listdir( config.keys_folder ):
with open( config.keys_folder + "/" + file, "r" ) as fp:
gpg.import_keys( fp.read() )
app.run( debug = debug, host = "0.0.0.0", threaded = True )